Basic Information
Locus ID:
AsparagusV1_04.377.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 9143367 | 9151048 | - | AsparagusV1_04.377.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.47 | 73,518.28 Da | 47.12 | 86.40 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 334 | 598 | 2.31426E-97 | - |
| Pfam | PF19160 | SPARK | 24 | 157 | 1.9E-19 | IPR043891 |
| Pfam | PF00069 | Protein kinase domain | 332 | 594 | 1.2E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 312 | 596 | 5.8E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 303 | 403 | 8.9E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 404 | 608 | 6.4E-63 | - |
| SMART | SM00220 | serkin_6 | 328 | 603 | 2.2E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 328 | 600 | 38.94413 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 334 | 356 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 448 | 460 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19300.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020260058.1 | probable receptor-like protein kinase At1g49730 [Asparagus officinalis] | 0 |
| Q9FX99 | Probable receptor-like protein kinase At1g49730 OS=Arabidopsis thaliana OX=3702 GN=At1g49730 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1EY05 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F3770 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg28667 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_26576 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah009904 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g216070 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg11167, Sbi_jg46141 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg20481 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005470 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl55728, Sgl60942 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000036787, gene:ENSEOMG00000051857 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7BG0004880, CQ.Regalona.r1.9AG0019540 |
| Apiaceae | Apium graveolens | 1 | Ag9G00164 |
| Arecaceae | Cocos nucifera | 2 | COCNU_01G019200, COCNU_11G000230 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103701255, gene-LOC103710141, gene-LOC120112464 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.377.V1.1, AsparagusV1_09.855.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri15G31892, Ftri3G18440 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G49730.1, AT3G19300.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10011356m.g.v1.0, Thhalv10020248m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp1g36620.v2.2, Sp3g17380.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g044960.2N, BniB04g060860.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G2131 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G2358 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno07g09130, gene.Cymno08g07750 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate05g13950, gene.Thate06g10110 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10998 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG08.489 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00012328 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G00645, Lb4G21667 |
| Poaceae | Echinochloa crus-galli | 5 | AH09.2803, BH09.1083, BH09.3033, CH09.1219, CH09.3204 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_4AG0298440, gene-QOZ80_4AG0317490 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0168520.1, HORVU.MOREX.r3.2HG0215690.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_047674 |
| Poaceae | Oryza coarctata | 4 | Oco07G005920, Oco07G019940, Oco08G005920, Oco08G019300 |
| Poaceae | Oryza sativa | 2 | LOC_Os04g35114.1, LOC_Os04g59320.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_06G095900, gene-BS78_06G293600 |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0302685, Pt_Chr0302725, Pt_Chr0306902, Pt_Chr0306907 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr23G000280, Chr25G000200, Chr25G011300, Chr26G018920 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G1012700, Tel2E01G534700 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC2AG043920, gene_TRIDC2AG080780 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2A02G302800.1, TraesCS2A02G570800.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb076230_P001, Zm00001eb082830_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-23271 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g20740 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.1533, evm.TU.LG09.338 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc05g16840, gene.Posoc05g20260 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_1_RagTag.2092, evm.TU.Scaffold_2_RagTag.326 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-4869, nbisL1-mrna-5901 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13160 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-3445, nbisL1-mrna-3446 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000016l.209 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00016421 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-2502, nbisL1-mrna-4768 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-14031 |
| Salicaceae | Populus euphratica | 2 | populus_peu09014, populus_peu36329 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132599032 |
| Solanaceae | Solanum chilense | 1 | SOLCI005038200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107005875 |
| Tamaricaceae | Reaumuria soongarica | 2 | gene_16885, gene_16886 |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G0898 |
| Zosteraceae | Zostera marina | 2 | Zosma02g07030.v3.1, Zosma05g11770.v3.1 |