Basic Information
Locus ID:
AsparagusV1_04.2936.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 122647657 | 122653041 | + | AsparagusV1_04.2936.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 77,689.73 Da | 44.47 | 90.39 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 350 | 618 | 3.01541E-85 | - |
| Pfam | PF00069 | Protein kinase domain | 346 | 554 | 7.1E-44 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 13 | 153 | 5.7E-8 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 13 | 153 | 1.26E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 325 | 621 | 8.5E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 419 | 640 | 4.0E-56 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 11 | 153 | 1.9E-8 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 315 | 418 | 4.3E-29 | - |
| SMART | SM00220 | serkin_6 | 344 | 616 | 9.2E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 344 | 623 | 36.343475 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 350 | 372 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 466 | 478 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 187 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77280.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_020262110.1 | probable receptor-like protein kinase At5g18500 [Asparagus officinalis] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1F798 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F29360 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology