Basic Information
Locus ID:
AsparagusV1_04.288.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 6623312 | 6624325 | - | AsparagusV1_04.288.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 36,638.69 Da | 40.98 | 97.80 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 217 | 305 | 2.6E-13 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 3 | 54 | 7.2E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 66 | 103 | 1.2E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 3 | 135 | 6.8E-29 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 215 | 326 | 3.79E-21 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 202 | 328 | 1.0E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 142 | 7.3E-41 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 215 | 337 | 12.711427 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 221 | 245 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 66 | 79 | 6.2E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 21 | 34 | 6.2E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_020262182.1 | LOW QUALITY PROTEIN: MDIS1-interacting receptor like kinase 1-like [Asparagus officinalis] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1F391 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F2880 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology