halophFGD

Basic Information

Locus ID: AsparagusV1_04.2628.V1.1

Species & Taxonomic ID: Asparagus officinalis & 4686

Genome Assembly: GCA_001876935.1

Description: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	102745185	102745975	-	AsparagusV1_04.2628.V1.1

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.57	15,979.26 Da	44.86	116.10	0.44

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00141	Peroxidase	40	134	1.0E-23	IPR002016
SUPERFAMILY	SSF48113	Heme-dependent peroxidases	23	135	1.3E-34	IPR010255
Gene3D	G3DSA:1.10.520.10	-	24	144	1.2E-45	-
ProSiteProfiles	PS50873	Plant heme peroxidase family profile.	23	146	31.070835	IPR002016
PRINTS	PR00458	Haem peroxidase superfamily signature	117	134	9.4E-8	IPR002016
PRINTS	PR00458	Haem peroxidase superfamily signature	55	69	9.4E-8	IPR002016
PRINTS	PR00461	Plant peroxidase signature	97	110	1.5E-20	IPR000823
PRINTS	PR00461	Plant peroxidase signature	33	52	1.5E-20	IPR000823
PRINTS	PR00461	Plant peroxidase signature	116	126	1.5E-20	IPR000823
PRINTS	PR00461	Plant peroxidase signature	57	77	1.5E-20	IPR000823

Gene Ontology

Biological Process:

GO:0006979 (response to oxidative stress)

Molecular Function:

GO:0004601 (peroxidase activity) GO:0020037 (heme binding)

KEGG Pathway

KO Term:

K00430 (peroxidase [EC:1.11.1.7])

Pathway:

ko00940 (Phenylpropanoid biosynthesis) map00940 (Phenylpropanoid biosynthesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)

Reaction:

R00602 (Methanol + Hydrogen peroxide <=> Formaldehyde + 2 H2O) R02596 (Coniferyl alcohol <=> Guaiacyl lignin) R03919 (Sinapyl alcohol <=> Syringyl lignin) R04007 (4-Coumaryl alcohol <=> p-Hydroxyphenyl lignin) R07443 (5-Hydroxyconiferyl alcohol <=> 5-Hydroxy-guaiacyl lignin)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G14130.1	Peroxidase superfamily protein.
RefSeq	XP_020263127.1	peroxidase 55-like [Asparagus officinalis]
Swiss-Prot	Q96509	Peroxidase 55 OS=Arabidopsis thaliana OX=3702 GN=PER55 PE=1 SV=1
TrEMBL	A0A5P1F8P1	PEROXIDASE_4 domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F26280 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg15606, Sbi_jg19613, Sbi_jg27518, Sbi_jg53453 ... Sbi_jg60288, Sbi_jg6976
Apiaceae	Apium graveolens	1	Ag7G01434
Asparagaceae	Asparagus officinalis	3	AsparagusV1_04.1484.V1.1, AsparagusV1_04.2628.V1.1 ... AsparagusV1_09.1390.V1.1
Poaceae	Zea mays	1	Zm00001eb058250_P001
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_6_RagTag.22