Basic Information
Locus ID:
AsparagusV1_04.2518.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 95228639 | 95232159 | - | AsparagusV1_04.2518.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 48,554.98 Da | 45.47 | 84.52 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 144 | 410 | 7.0258E-102 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 142 | 409 | 1.3E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 113 | 411 | 2.43E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 120 | 213 | 3.6E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 214 | 422 | 1.6E-62 | - |
| SMART | SM00220 | serkin_6 | 138 | 416 | 4.2E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 138 | 415 | 37.799274 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 260 | 272 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 144 | 166 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 439 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010919126.1 | probable serine/threonine-protein kinase At1g01540 [Elaeis guineensis] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5P1F8F8 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F25180 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology