Basic Information
Locus ID:
AsparagusV1_04.2344.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Short Name:
TTG1
Description:
transparent testa glabra
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 85011635 | 85012342 | + | AsparagusV1_04.2344.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.81 | 25,981.56 Da | 98.10 | 69.45 | -0.50 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24520.1 | Transducin/WD40 repeat-like superfamily protein. Required for the accumulation of purple anthocyanins in leaves and stems. Involved in trichome and root hair development. Controls epidermal cell fate specification. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Based on clonal analysis and other methonds TTG1 has been shown to act non-cell autonomously and to move via plasmodesmata between cells.Localization and levels of TTG1 affect patterning of leaf trichomes. | 0 |
| RefSeq | XP_020263034.1 | LOW QUALITY PROTEIN: protein TRANSPARENT TESTA GLABRA 1-like [Asparagus officinalis] | 0 |
| TrEMBL | A0A5P1F5W5 | Vegetative cell wall protein gp1-like OS=Asparagus officinalis OX=4686 GN=A4U43_C04F23440 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology