Basic Information
Locus ID:
AsparagusV1_04.2260.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 79042189 | 79042566 | + | AsparagusV1_04.2260.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.73 | 12,767.72 Da | 42.93 | 68.33 | -0.98 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 65 | 6.12E-9 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 4 | 60 | 1.9E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 125 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14370.1 | Protein kinase superfamily protein. The WAG2 and its homolog, WAG1 each encodes protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons. | 0 |
| RefSeq | XP_051124851.1 | serine/threonine-protein kinase WAG1-like [Andrographis paniculata] | 0 |
| Q9LUL2 | Serine/threonine-protein kinase WAG2 OS=Arabidopsis thaliana OX=3702 GN=WAG2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1F3J3 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F22600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005462 |
| Anacardiaceae | Pistacia vera | 18 | pistato.v30103110, pistato.v30104160, pistato.v30104180 ... |
| Apiaceae | Apium graveolens | 1 | Ag5G00025 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.2260.V1.1 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb5G28350 |
| Poaceae | Echinochloa crus-galli | 1 | AH04.12 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-41285 |