Basic Information
Locus ID:
AsparagusV1_04.2221.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 76100968 | 76101791 | - | AsparagusV1_04.2221.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 25,379.92 Da | 61.90 | 94.63 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 118 | 203 | 6.8E-16 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 120 | 204 | 1.75E-29 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 113 | 222 | 5.5E-31 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 231 | 15.524093 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 174 | 186 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45590.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020262972.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC109838950 [Asparagus officinalis] | 0 |
| O64639 | Receptor-like serine/threonine-protein kinase At2g45590 OS=Arabidopsis thaliana OX=3702 GN=At2g45590 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1F867 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F22210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 8 | COCNU_03G000690, COCNU_07G014200, scaffold000579G000010 ... |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.2221.V1.1 |