Basic Information
Locus ID:
AsparagusV1_04.2180.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Major Facilitator Superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 74130953 | 74151738 | - | AsparagusV1_04.2180.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 47,529.64 Da | 36.91 | 104.21 | 0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 10 | 399 | 1.17799E-48 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 10 | 382 | 1.0E-25 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 8 | 428 | 1.01E-36 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 6 | 432 | 7.2E-40 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 6 | 427 | 10.930861 | IPR020846 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_020261673.1 | hippocampus abundant transcript-like protein 1 isoform X2 [Asparagus officinalis] | 0 |
| TrEMBL | A0A5P1F3D8 | MFS domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F21800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology