Basic Information
Locus ID:
AsparagusV1_04.2040.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Type I inositol-1,4,5-trisphosphate 5-phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 68045298 | 68067384 | + | AsparagusV1_04.2040.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 112,079.34 Da | 42.83 | 80.49 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 447 | 794 | 7.91714E-101 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 452 | 785 | 3.2E-14 | IPR005135 |
| SUPERFAMILY | SSF56219 | DNase I-like | 424 | 817 | 1.56E-57 | IPR036691 |
| SUPERFAMILY | SSF101908 | Putative isomerase YbhE | 72 | 428 | 1.07E-25 | - |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 427 | 824 | 1.6E-100 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 55 | 426 | 2.7E-18 | IPR015943 |
| SMART | SM00320 | WD40_4 | 303 | 341 | 10.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 343 | 380 | 25.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 382 | 419 | 180.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 126 | 164 | 0.056 | IPR001680 |
| SMART | SM00128 | i5p_5 | 445 | 800 | 4.4E-86 | IPR000300 |
| SMART | SM00320 | WD40_4 | 61 | 102 | 21.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 621 | 651 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 621 | 650 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_020262886.1 | LOW QUALITY PROTEIN: type II inositol polyphosphate 5-phosphatase 15-like [Asparagus officinalis] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5P1F478 | IPPc domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F20400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology