Basic Information
Locus ID:
AsparagusV1_04.1776.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 56576087 | 56584414 | - | AsparagusV1_04.1776.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.63 | 48,146.50 Da | 49.35 | 76.79 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 95 | 373 | 1.38535E-92 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 94 | 368 | 2.7E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 64 | 369 | 1.75E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 175 | 391 | 7.9E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 65 | 174 | 9.5E-30 | - |
| SMART | SM00220 | serkin_6 | 89 | 374 | 7.6E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 89 | 374 | 41.332775 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 95 | 123 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 54 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09830.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020261360.1 | probable serine/threonine-protein kinase PIX7 isoform X1 [Asparagus officinalis] | 0 |
| Q9SF86 | Serine/threonine-protein kinase PCRK1 OS=Arabidopsis thaliana OX=3702 GN=PCRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1F1P4 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F17760 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology