Basic Information
Locus ID:
AsparagusV1_04.1391.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 40373793 | 40383372 | - | AsparagusV1_04.1391.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.65 | 37,981.99 Da | 44.97 | 86.13 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 27 | 333 | 3.65655E-126 | - |
| Pfam | PF00069 | Protein kinase domain | 49 | 172 | 6.1E-15 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 248 | 330 | 1.8E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 32 | 335 | 1.21E-57 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 14 | 114 | 5.5E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 115 | 340 | 1.6E-51 | - |
| SMART | SM00220 | serkin_6 | 38 | 345 | 2.7E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 13 | 345 | 24.993872 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 159 | 171 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17530.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020261015.1 | probable serine/threonine-protein kinase sky1 [Asparagus officinalis] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1F1B9 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F13910 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology