Basic Information
Locus ID:
AsparagusV1_04.1303.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 36578416 | 36578847 | - | AsparagusV1_04.1303.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.79 | 16,340.05 Da | 38.43 | 100.07 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 57 | 141 | 2.9E-15 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 36 | 141 | 1.68E-25 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 24 | 129 | 1.5E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 55 | 143 | 13.389858 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 61 | 83 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_020262540.1 | LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Asparagus officinalis] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1F5U3 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F13030 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.1303.V1.1 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_UnG0729540 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_037781, gene-QYE76_062350 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr18G004740 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G771600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7BG056900, gene_TRIDC7BG056990 |