Basic Information
Locus ID:
AsparagusV1_03.870.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 19115200 | 19130461 | + | AsparagusV1_03.870.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.66 | 24,977.81 Da | 53.92 | 65.68 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 9 | 102 | 3.5E-9 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 102 | 8.76E-19 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 164 | 9.0E-26 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 154 | 11.368696 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 215 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 149 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 229 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59010.2 | Protein kinase protein with tetratricopeptide repeat domain. | 0 |
| RefSeq | XP_020244714.1 | probable serine/threonine-protein kinase BSK3 [Asparagus officinalis] | 0 |
| Q9FIL1 | Serine/threonine-protein kinase BSK5 OS=Arabidopsis thaliana OX=3702 GN=BSK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1F8E1 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F8700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_17562, gene_6038, gene_8727 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00014196 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_02.1847.V1.1, AsparagusV1_03.870.V1.1 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00018224, Pov_00018314 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr14G010560 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-23234, nbis-gene-6236 |