Basic Information
Locus ID:
AsparagusV1_03.752.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Calcium-dependent channel, 7TM region, putative phosphate
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 16718693 | 16740946 | - | AsparagusV1_03.752.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 81,398.72 Da | 44.02 | 99.92 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 186 | 343 | 7.8E-23 | IPR027815 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 165 | 1.8E-37 | IPR032880 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 354 | 620 | 2.9E-76 | IPR003864 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 684 | 716 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 700 | 716 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58520.1 | lipases;hydrolases, acting on ester bonds. | 0 |
| RefSeq | XP_020256351.1 | CSC1-like protein RXW8 isoform X1 [Asparagus officinalis] | 0 |
| F4IBD7 | CSC1-like protein RXW8 OS=Arabidopsis thaliana OX=3702 GN=RXW8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1F845 | CSC1-like protein RXW8 OS=Asparagus officinalis OX=4686 GN=A4U43_C03F7520 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology