Basic Information
Locus ID:
AsparagusV1_03.629.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 13530833 | 13535412 | + | AsparagusV1_03.629.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 31,827.35 Da | 53.50 | 60.72 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 39 | 136 | 8.2E-20 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 155 | 199 | 6.3E-6 | IPR017892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 13 | 190 | 2.38E-33 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 155 | 165 | 8.2E-44 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 35 | 154 | 8.2E-44 | - |
| SMART | SM00220 | serkin_6 | 5 | 136 | 4.9E-6 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 137 | 201 | 3.4E-9 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 136 | 17.050564 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 137 | 209 | 14.548021 | IPR000961 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 278 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14350.3 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_020256225.1 | serine/threonine-protein kinase 38-like [Asparagus officinalis] | 0 |
| Q6TGC6 | Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii OX=4754 GN=CBK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1F8D5 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F6290 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000014588 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.629.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri14G19378 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00009113 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-47544 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-14891 |