Basic Information
Locus ID:
AsparagusV1_03.628.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 13525754 | 13529773 | + | AsparagusV1_03.628.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.11 | 38,707.94 Da | 56.71 | 76.96 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 120 | 272 | 5.4E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 98 | 275 | 1.07E-56 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 203 | 271 | 4.8E-70 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 90 | 202 | 4.8E-70 | - |
| SMART | SM00220 | serkin_6 | 119 | 329 | 1.4E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 119 | 332 | 32.795841 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 125 | 148 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 238 | 250 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20470.3 | - | 0 |
| RefSeq | XP_020256225.1 | serine/threonine-protein kinase 38-like [Asparagus officinalis] | 0 |
| Q9Y2H1 | Serine/threonine-protein kinase 38-like OS=Homo sapiens OX=9606 GN=STK38L PE=1 SV=3 | 0 | |
| TrEMBL | A0A5P1FCV9 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F6280 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology