Basic Information
Locus ID:
AsparagusV1_03.563.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Peptidyl-prolyl cis-trans isomerase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 12110652 | 12126001 | + | AsparagusV1_03.563.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.42 | 76,133.21 Da | 80.10 | 47.01 | -1.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01926 | cyclophilin_ABH_like | 7 | 173 | 4.8446E-101 | - |
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 20 | 173 | 2.2E-45 | IPR002130 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 4 | 175 | 7.16E-70 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 1 | 182 | 6.1E-80 | IPR029000 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 10 | 174 | 43.096539 | IPR002130 |
| ProSitePatterns | PS00170 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 59 | 76 | - | IPR020892 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 134 | 3.2E-34 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 64 | 76 | 3.2E-34 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 135 | 150 | 3.2E-34 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 27 | 42 | 3.2E-34 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 107 | 122 | 3.2E-34 | IPR002130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 443 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 570 | 588 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 663 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 531 | 560 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 610 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 689 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 302 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63400.2 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein. | 0 |
| RefSeq | XP_020256142.1 | peptidyl-prolyl cis-trans isomerase CYP63-like isoform X1 [Asparagus officinalis] | 0 |
| Q9LY75 | Peptidyl-prolyl cis-trans isomerase CYP63 OS=Arabidopsis thaliana OX=3702 GN=CYP63 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FCV2 | PPIase cyclophilin-type domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F5630 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology