Basic Information
Locus ID:
AsparagusV1_03.526.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 11430570 | 11435642 | - | AsparagusV1_03.526.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.76 | 31,639.15 Da | 38.61 | 87.88 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 24 | 290 | 3.9E-66 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 21 | 290 | 2.75E-66 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 16 | 292 | 8.1E-87 | IPR036589 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 11 | 292 | 38.112774 | IPR003726 |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_020256104.1 | homocysteine S-methyltransferase 2-like [Asparagus officinalis] | 0 |
| Q9FUM9 | Homocysteine S-methyltransferase 2 OS=Zea mays OX=4577 GN=HMT-2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1F9C9 | Hcy-binding domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F5260 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology