Basic Information
Locus ID:
AsparagusV1_03.465.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 10282856 | 10284125 | - | AsparagusV1_03.465.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 17,569.22 Da | 28.30 | 95.06 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 21 | 118 | 9.71879E-40 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 30 | 108 | 4.6E-22 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 19 | 119 | 6.38E-27 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 19 | 124 | 3.2E-30 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 20 | 120 | 33.778278 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G26330.1 | Cupredoxin superfamily protein. | 0 |
| RefSeq | XP_020256015.1 | mavicyanin-like [Asparagus officinalis] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1F7W8 | Phytocyanin domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F4650 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology