Basic Information
Locus ID:
AsparagusV1_03.464.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 10258959 | 10260691 | - | AsparagusV1_03.464.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.00 | 27,610.97 Da | 28.37 | 65.52 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 140 | 239 | 1.85271E-36 | - |
| CDD | cd04216 | Phytocyanin | 24 | 123 | 7.50252E-34 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 34 | 117 | 8.8E-23 | IPR003245 |
| Pfam | PF02298 | Plastocyanin-like domain | 150 | 231 | 2.2E-21 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 23 | 123 | 3.53E-29 | IPR008972 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 140 | 239 | 1.27E-27 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 140 | 241 | 1.3E-27 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 21 | 125 | 4.3E-31 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 24 | 125 | 32.305843 | IPR003245 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 140 | 241 | 32.889126 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31050.1 | Cupredoxin superfamily protein. | 0 |
| RefSeq | XP_020255107.1 | blue copper protein-like [Asparagus officinalis] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1FCD8 | Phytocyanin domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F4640 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology