Basic Information
Locus ID:
AsparagusV1_03.462.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 10224698 | 10226346 | + | AsparagusV1_03.462.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.46 | 24,206.09 Da | 35.59 | 73.24 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 24 | 123 | 1.18803E-32 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 170 | 205 | 2.0E-4 | IPR003245 |
| Pfam | PF02298 | Plastocyanin-like domain | 34 | 117 | 9.6E-23 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 23 | 123 | 1.09E-29 | IPR008972 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 140 | 211 | 3.02E-10 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 21 | 125 | 2.3E-30 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 165 | 213 | 2.0E-7 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 24 | 125 | 33.55777 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31050.1 | Cupredoxin superfamily protein. | 0 |
| RefSeq | XP_020258234.1 | uclacyanin 1-like [Asparagus officinalis] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1FBS1 | Phytocyanin domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F4620 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology