Basic Information
Locus ID:
AsparagusV1_03.461.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 10218454 | 10220150 | - | AsparagusV1_03.461.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.64 | 27,591.75 Da | 20.77 | 66.49 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 25 | 124 | 9.83944E-32 | - |
| CDD | cd04216 | Phytocyanin | 142 | 240 | 5.68206E-37 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 151 | 234 | 7.4E-23 | IPR003245 |
| Pfam | PF02298 | Plastocyanin-like domain | 35 | 118 | 5.4E-22 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 141 | 240 | 6.82E-29 | IPR008972 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 25 | 124 | 4.07E-28 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 23 | 126 | 3.5E-29 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 141 | 242 | 2.7E-29 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 25 | 126 | 32.362751 | IPR003245 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 141 | 242 | 33.07407 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17675.1 | Cupredoxin superfamily protein. Encodes a Plantacyanin/Basic blue family protein | 0 |
| RefSeq | XP_020258233.1 | lamin-like protein [Asparagus officinalis] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1F7D2 | Phytocyanin domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F4610 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology