Basic Information
Locus ID:
AsparagusV1_03.459.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 10109764 | 10111548 | - | AsparagusV1_03.459.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 54,179.34 Da | 39.62 | 64.27 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 367 | 466 | 1.09061E-36 | - |
| CDD | cd04216 | Phytocyanin | 98 | 197 | 3.97532E-37 | - |
| CDD | cd04216 | Phytocyanin | 241 | 340 | 9.63887E-37 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 5 | 60 | 1.5E-9 | IPR003245 |
| Pfam | PF02298 | Plastocyanin-like domain | 108 | 191 | 2.2E-22 | IPR003245 |
| Pfam | PF02298 | Plastocyanin-like domain | 251 | 334 | 1.6E-22 | IPR003245 |
| Pfam | PF02298 | Plastocyanin-like domain | 377 | 460 | 7.9E-21 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 367 | 467 | 1.18E-28 | IPR008972 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 98 | 198 | 4.06E-29 | IPR008972 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 241 | 341 | 1.51E-29 | IPR008972 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 2 | 67 | 2.65E-14 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 1 | 76 | 7.8E-16 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 97 | 199 | 6.7E-32 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 365 | 469 | 4.2E-31 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 241 | 351 | 1.0E-31 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 241 | 342 | 33.621788 | IPR003245 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 1 | 68 | 20.505045 | IPR003245 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 367 | 468 | 35.990482 | IPR003245 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 98 | 199 | 36.374596 | IPR003245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 475 | 496 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G45063.2 | copper ion binding;electron carriers. | 0 |
| RefSeq | XP_020256012.1 | uncharacterized protein LOC109832926 [Asparagus officinalis] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1F7C5 | Phytocyanin domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F4590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology