Basic Information
Locus ID:
AsparagusV1_03.458.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 10081652 | 10082813 | - | AsparagusV1_03.458.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 37,039.67 Da | 36.30 | 69.91 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 19 | 118 | 7.61577E-36 | - |
| CDD | cd04216 | Phytocyanin | 161 | 273 | 1.79941E-34 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 29 | 112 | 8.8E-23 | IPR003245 |
| Pfam | PF02298 | Plastocyanin-like domain | 171 | 267 | 6.6E-17 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 18 | 119 | 8.27E-30 | IPR008972 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 161 | 274 | 1.89E-26 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 16 | 121 | 2.4E-32 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 161 | 286 | 1.4E-29 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 161 | 275 | 31.167732 | IPR003245 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 19 | 120 | 36.154087 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17675.1 | Cupredoxin superfamily protein. Encodes a Plantacyanin/Basic blue family protein | 0 |
| RefSeq | XP_020256012.1 | uncharacterized protein LOC109832926 [Asparagus officinalis] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1F7B6 | Phytocyanin domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F4580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology