Basic Information
Locus ID:
AsparagusV1_03.2933.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Serine threonine-protein kinase HT1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 102696977 | 102702917 | + | AsparagusV1_03.2933.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 43,260.18 Da | 25.47 | 83.53 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 90 | 361 | 3.49166E-113 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 87 | 361 | 1.9E-60 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 65 | 361 | 4.05E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 189 | 370 | 2.0E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 72 | 165 | 2.5E-19 | - |
| SMART | SM00220 | serkin_6 | 84 | 364 | 4.6E-58 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 84 | 364 | 40.696747 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 228 | 240 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 222 | 240 | 9.9E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 332 | 354 | 9.9E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 184 | 197 | 9.9E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 288 | 310 | 9.9E-16 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020259068.1 | probable serine/threonine-protein kinase fhkD [Asparagus officinalis] | 0 |
| Q9FGB1 | Serine/threonine-protein kinase 52 OS=Arabidopsis thaliana OX=3702 GN=CBC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FIY0 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F29330 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology