Basic Information
Locus ID:
AsparagusV1_03.293.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the eukaryotic ribosomal protein eS6 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 5885283 | 5888311 | - | AsparagusV1_03.293.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.32 | 9,549.70 Da | 42.48 | 84.56 | -0.11 |
Protein Domain:
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance)
map01521 (EGFR tyrosine kinase inhibitor resistance)
ko03010 (Ribosome)
map03010 (Ribosome)
ko04066 (HIF-1 signaling pathway)
map04066 (HIF-1 signaling pathway)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31700.1 | ribosomal protein S6. Encodes a putative ribosomal protein S6 (rps6a). RPS6A and RPS6B are fully redundant and essential during gametogenesis. | 0 |
| RefSeq | XP_021860077.1 | 40S ribosomal protein S6-like [Spinacia oleracea] | 0 |
| Q9M3V8 | Small ribosomal subunit protein eS6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1F6V6 | 40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=A4U43_C03F2930 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology