halophFGD

Basic Information

Locus ID: AsparagusV1_03.2703.V1.1

Species & Taxonomic ID: Asparagus officinalis & 4686

Genome Assembly: GCA_001876935.1

Description: Wall-associated receptor kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	90579727	90581734	+	AsparagusV1_03.2703.V1.1

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.15	17,870.73 Da	52.55	95.59	0.16

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	90	155	9.37E-10	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	81	160	3.0E-13	-
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	117	139	-	IPR017441
Coils	Coil	Coil	161	161	-	-

Gene Ontology

Molecular Function:

GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G26700.4	-
RefSeq	XP_020255352.1	protein NSP-INTERACTING KINASE 1-like [Asparagus officinalis]
Swiss-Prot	Q9SFX0	Probable serine/threonine-protein kinase PBL22 OS=Arabidopsis thaliana OX=3702 GN=PBL22 PE=2 SV=1
TrEMBL	A0A5P1FD97	Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F27030 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Asparagaceae	Asparagus officinalis	1	AsparagusV1_03.2703.V1.1
Poaceae	Lolium multiflorum	1	gene-QYE76_018303
Poaceae	Oryza coarctata	1	Oco02G030250
Poaceae	Triticum aestivum	1	TraesCS2D02G280400.1