Basic Information
Locus ID:
AsparagusV1_03.2591.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 83350992 | 83354354 | + | AsparagusV1_03.2591.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 122,018.34 Da | 36.07 | 99.57 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 847 | 1115 | 1.77869E-90 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 66 | 101 | 7.4E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 844 | 1041 | 1.8E-42 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 252 | 274 | 0.0095 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 179 | 238 | 1.7E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 621 | 662 | 3.1E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 118 | 456 | 1.65E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 352 | 741 | 5.99E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 820 | 1112 | 2.02E-74 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 476 | 753 | 4.2E-52 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 65 | 335 | 3.0E-71 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 340 | 467 | 7.2E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 805 | 916 | 2.2E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 917 | 1117 | 5.6E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 201 | 224 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 154 | 177 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 601 | 624 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 625 | 648 | 170.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 841 | 1093 | 1.8E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 225 | 249 | 1.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 649 | 673 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 298 | 321 | 73.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 841 | 1120 | 38.110222 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 847 | 869 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 961 | 973 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_020258006.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Asparagus officinalis] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FCZ6 | Protein kinase domain-containing protein (Fragment) OS=Asparagus officinalis OX=4686 GN=A4U43_C03F25910 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology