Basic Information
Locus ID:
AsparagusV1_03.2398.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 69885342 | 69900394 | - | AsparagusV1_03.2398.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 96,543.84 Da | 47.65 | 91.70 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 612 | 861 | 4.47502E-140 | - |
| Pfam | PF00069 | Protein kinase domain | 606 | 860 | 2.9E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 589 | 860 | 8.23E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 604 | 678 | 6.2E-79 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 679 | 860 | 6.2E-79 | - |
| SMART | SM00220 | serkin_6 | 606 | 856 | 1.5E-66 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 606 | 861 | 42.562435 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 714 | 726 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 279 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62310.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. | 0 |
| RefSeq | XP_020258833.1 | probable serine/threonine protein kinase IRE [Asparagus officinalis] | 0 |
| Q9LE81 | Probable serine/threonine protein kinase IRE OS=Arabidopsis thaliana OX=3702 GN=IRE PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1FFD1 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F23980 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology