Basic Information
Locus ID:
AsparagusV1_03.2374.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 68249945 | 68256188 | + | AsparagusV1_03.2374.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 63,276.45 Da | 37.73 | 97.47 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 165 | 183 | 1.9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 305 | 508 | 1.6E-44 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 141 | 162 | 0.19 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 5 | 219 | 4.42E-42 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 296 | 518 | 1.75E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 291 | 380 | 3.4E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 381 | 569 | 8.1E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 239 | 2.1E-61 | IPR032675 |
| SMART | SM00220 | serkin_6 | 303 | 548 | 1.2E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 303 | 574 | 36.357609 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 309 | 331 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 425 | 437 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_020258821.1 | LRR receptor-like serine/threonine-protein kinase HSL2, partial [Asparagus officinalis] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FFB3 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F23740 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology