Basic Information
Locus ID:
AsparagusV1_03.2221.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 59699820 | 59718276 | + | AsparagusV1_03.2221.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 87,759.37 Da | 47.52 | 90.00 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 497 | 766 | 8.8E-36 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 237 | 6.24E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 473 | 766 | 4.24E-59 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 570 | 794 | 4.5E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 43 | 145 | 4.7E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 463 | 568 | 5.1E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 251 | 2.0E-17 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 492 | 770 | 31.45311 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 361 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 777 | 798 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 296 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_020257758.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X2 [Asparagus officinalis] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FD16 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F22210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology