Basic Information
Locus ID:
AsparagusV1_03.1909.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 46598064 | 46604411 | + | AsparagusV1_03.1909.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.63 | 51,230.53 Da | 39.74 | 97.28 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 1 | 260 | 2.81512E-127 | - |
| Pfam | PF00069 | Protein kinase domain | 3 | 261 | 1.5E-70 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 289 | 7.55E-82 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 290 | 443 | 2.79E-15 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 301 | 370 | 2.1E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 88 | 6.6E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 89 | 279 | 9.0E-62 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 280 | 440 | 2.1E-17 | - |
| SMART | SM00220 | serkin_6 | 1 | 261 | 1.7E-95 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 261 | 51.495121 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 303 | 338 | 8.404312 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 5 | 31 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 123 | 135 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_020257492.1 | CDPK-related protein kinase-like [Asparagus officinalis] | 0 |
| P53681 | CDPK-related protein kinase OS=Daucus carota OX=4039 GN=CRK PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1FBA6 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F19090 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology