Basic Information
Locus ID:
AsparagusV1_03.1553.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 35594270 | 35600777 | + | AsparagusV1_03.1553.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 50,206.72 Da | 35.23 | 95.45 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 23 | 343 | 7.3E-79 | IPR000490 |
| Pfam | PF07983 | X8 domain | 360 | 430 | 3.7E-19 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 23 | 343 | 2.66E-84 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 22 | 348 | 2.3E-113 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 353 | 445 | 2.0E-10 | - |
| SMART | SM00768 | X8_cls | 359 | 444 | 2.2E-48 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_020257164.1 | glucan endo-1,3-beta-glucosidase 3-like [Asparagus officinalis] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5P1FF96 | X8 domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F15530 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology