Basic Information
Locus ID:
AsparagusV1_03.1550.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 35507391 | 35517396 | + | AsparagusV1_03.1550.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 35,572.08 Da | 43.69 | 97.54 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 20 | 320 | 2.3E-73 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 15 | 323 | 1.57E-79 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 7 | 319 | 1.4E-95 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 2 | 324 | 2.2E-8 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 7 | 321 | 48.146667 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_020257159.1 | homocysteine S-methyltransferase 1 isoform X2 [Asparagus officinalis] | 0 |
| Q9SDL7 | Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HMT-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FAB5 | Hcy-binding domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F15500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology