Basic Information
Locus ID:
AsparagusV1_03.1467.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Short Name:
SnRK2.4
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 33599168 | 33599563 | - | AsparagusV1_03.1467.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 15,261.09 Da | 55.01 | 89.92 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 74 | 1.66E-10 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 126 | 1.6E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 68 | 9.884626 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 131 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63650.1 | SNF1-related protein kinase 2.5. encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. | 0 |
| RefSeq | XP_020258527.1 | serine/threonine-protein kinase SAPK7-like [Asparagus officinalis] | 0 |
| Q7XQP4 | Serine/threonine-protein kinase SAPK7 OS=Oryza sativa subsp. japonica OX=39947 GN=SAPK7 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5P1FA13 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F14670 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.1467.V1.1 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.7HG0747850.1, HORVU.MOREX.r3.7HG0747920.1 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G939200 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG075090 |
| Poaceae | Triticum aestivum | 2 | TraesCS7A02G539000.2, TraesCS7D02G525100.1 |