Basic Information
Locus ID:
AsparagusV1_03.1391.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 31324707 | 31344013 | + | AsparagusV1_03.1391.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 203,266.69 Da | 50.25 | 76.03 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 390 | 662 | 9.85196E-135 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1521 | 1780 | 1.56929E-143 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1725 | 1777 | 2.2E-6 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 412 | 656 | 1.4E-31 | IPR002423 |
| Pfam | PF01363 | FYVE zinc finger | 42 | 110 | 1.3E-17 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1560 | 1721 | 1.7E-33 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 456 | 628 | 7.06E-43 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1519 | 1780 | 1.5E-79 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 40 | 112 | 2.16E-19 | IPR011011 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1496 | 1641 | 8.1E-37 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 455 | 628 | 8.1E-55 | IPR027409 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 34 | 120 | 9.8E-22 | IPR013083 |
| Gene3D | G3DSA:3.30.810.10 | - | 1643 | 1781 | 1.8E-41 | - |
| SMART | SM00064 | fyve_4 | 37 | 112 | 9.9E-20 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1492 | 1781 | 1.3E-118 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1466 | 1780 | 55.960365 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 45 | 111 | 13.108553 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 350 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1193 | 1211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1794 | 1813 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1192 | 1211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 376 | - | - |
| Coils | Coil | Coil | 1092 | 1123 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_020256987.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like [Asparagus officinalis] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FBN1 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Asparagus officinalis OX=4686 GN=A4U43_C03F13910 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology