Basic Information
Locus ID:
AsparagusV1_03.1111.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 24255363 | 24258575 | - | AsparagusV1_03.1111.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 17,019.19 Da | 51.62 | 85.03 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 64 | 4.85E-14 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 80 | 2.7E-15 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 155 | 9.290998 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 44 | 56 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20480.1 | EF-TU receptor. Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu. | 0 |
| RefSeq | XP_020260655.1 | putative receptor-like protein kinase At3g47110 [Asparagus officinalis] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1F9W3 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F11110 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.1111.V1.1 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G0490 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00015546 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0343290.1.CDS1 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G016600 |