Basic Information
Locus ID:
AsparagusV1_03.1043.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 22991612 | 22994581 | - | AsparagusV1_03.1043.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.95 | 14,719.53 Da | 37.53 | 71.78 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 38 | 94 | 7.98E-10 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 29 | 97 | 3.5E-12 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26100.1 | casein kinase 1. Encodes a member of the casein kinase 1 protein family that is expressed in punctate particles at the cell periphery suggesting possible plasmodesmatal localization. | 0 |
| RefSeq | XP_009400542.1 | PREDICTED: casein kinase 1-like protein 2 isoform X3 [Musa acuminata subsp. malaccensis] | 0 |
| P42158 | Casein kinase 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=CKL1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5P1F8V4 | non-specific serine/threonine protein kinase OS=Asparagus officinalis OX=4686 GN=A4U43_C03F10430 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.1043.V1.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10015880m.g.v1.0 |
| Brassicaceae | Brassica nigra | 1 | BniB07g040720.2N |
| Poaceae | Zea mays | 5 | Zm00001eb075820_P001, Zm00001eb085650_P001 ... |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-8750 |