Basic Information
Locus ID:
AsparagusV1_02.88.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 1153283 | 1159812 | + | AsparagusV1_02.88.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 28,057.47 Da | 45.31 | 96.17 | 0.19 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_010912052.1 | F-box protein At1g11270 [Elaeis guineensis] | 0 |
| TrEMBL | A0A5P1FHI9 | DUF667 domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C02F880 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 10 | Ag2G00504, Ag2G01353, Ag5G02626, Ag5G02641, Ag6G00433 ... |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_02.88.V1.1 |
| Asteraceae | Flaveria trinervia | 9 | Ftri17G03779, Ftri17G11594, Ftri17G14448, Ftri17G18365 ... |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G1649 |