Basic Information
Locus ID:
AsparagusV1_02.835.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 17841922 | 17851170 | - | AsparagusV1_02.835.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.56 | 61,685.01 Da | 43.40 | 72.81 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 254 | 482 | 3.0E-63 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 2 | 212 | 6.2E-71 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 8 | 483 | 4.3E-216 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 272 | 448 | 4.3E-216 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 489 | 548 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 511 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 527 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_020253269.1 | proteinaceous RNase P 2 [Asparagus officinalis] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FKX5 | ribonuclease P OS=Asparagus officinalis OX=4686 GN=A4U43_C02F8350 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology