Basic Information
Locus ID:
AsparagusV1_02.729.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Short Name:
CPK1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 14971912 | 14990778 | - | AsparagusV1_02.729.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 20,247.07 Da | 49.55 | 70.11 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 114 | 170 | 2.69987E-9 | IPR002048 |
| Pfam | PF13405 | EF-hand domain | 114 | 142 | 1.8E-5 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 42 | 4.27E-7 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 93 | 169 | 1.01E-13 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 73 | 178 | 1.4E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 55 | 5.6E-5 | - |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 109 | 144 | 12.811786 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 178 | 9.149658 | IPR000719 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38910.1 | calcium-dependent protein kinase 20. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_020253819.1 | LOW QUALITY PROTEIN: calcium-dependent protein kinase 28-like [Asparagus officinalis] | 0 |
| Q6F3A6 | Calcium-dependent protein kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1FGL5 | EF-hand domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C02F7290 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_02.711.V1.1, AsparagusV1_02.729.V1.1 |