Basic Information
Locus ID:
AsparagusV1_02.254.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 3767772 | 3769694 | - | AsparagusV1_02.254.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 28,183.97 Da | 58.40 | 100.74 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 7 | 238 | 2.0E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 239 | 2.02E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 18 | 238 | 6.4E-72 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 17 | 6.4E-72 | - |
| SMART | SM00220 | serkin_6 | 1 | 238 | 7.5E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 238 | 29.431948 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 62 | 74 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40120.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020252674.1 | LOW QUALITY PROTEIN: serine/threonine-protein kinase ppk15-like [Asparagus officinalis] | 0 |
| Q9NR20 | Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Homo sapiens OX=9606 GN=DYRK4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5P1FF93 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C02F2540 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology