Basic Information
Locus ID:
AsparagusV1_02.2197.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 82867885 | 82875347 | + | AsparagusV1_02.2197.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 71,807.19 Da | 45.09 | 70.46 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 1 | 102 | 5.49327E-14 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 368 | 614 | 7.37237E-131 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 362 | 613 | 5.0E-68 | IPR001245 |
| Pfam | PF13426 | PAS domain | 7 | 102 | 3.7E-10 | IPR000014 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 612 | 1.01E-85 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 2 | 102 | 1.71E-19 | IPR035965 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 2 | 108 | 2.7E-23 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 355 | 439 | 1.1E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 440 | 646 | 7.9E-66 | - |
| SMART | SM00220 | serkin_6 | 362 | 615 | 3.4E-61 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 4 | 102 | 2.0E-13 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 1 | 61 | 14.867638 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 362 | 622 | 44.357452 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 481 | 493 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 436 | 449 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 585 | 607 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 522 | 532 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 541 | 563 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 475 | 493 | 2.6E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 225 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 171 | 239 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_020254949.1 | probable serine/threonine-protein kinase DDB_G0272254 [Asparagus officinalis] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FKY0 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C02F21970 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology