halophFGD

Basic Information

Locus ID: AsparagusV1_02.2148.V1.1

Species & Taxonomic ID: Asparagus officinalis & 4686

Genome Assembly: GCA_001876935.1

Short Name: BCE2

Description: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	82222851	82227347	-	AsparagusV1_02.2148.V1.1

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
11.16	20,610.09 Da	44.50	81.63	-0.46

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF17135	Ribosomal protein 60S L18 and 50S L18e	2	184	6.6E-91	IPR021131
SUPERFAMILY	SSF52080	Ribosomal proteins L15p and L18e	20	139	2.75E-26	IPR036227
Gene3D	G3DSA:3.100.10.10	-	1	184	5.3E-95	-

KEGG Pathway

KO Term:

K09699 (2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168])

Pathway:

ko00280 (Valine, leucine and isoleucine degradation) map00280 (Valine, leucine and isoleucine degradation) ko00640 (Propanoate metabolism) map00640 (Propanoate metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)

Module:

M00036 (Leucine degradation, leucine => acetoacetate + acetyl-CoA)

Reaction:

R02662 (2-Methylpropanoyl-CoA + Enzyme N6-(dihydrolipoyl)lysine <=> CoA + [Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] S-(2-methylpropanoyl)dihydrolipoyllysine) R03174 ((S)-2-Methylbutanoyl-CoA + Enzyme N6-(dihydrolipoyl)lysine <=> CoA + [Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] S-(2-methylbutanoyl)dihydrolipoyllysine) R04097 (3-Methylbutanoyl-CoA + Enzyme N6-(dihydrolipoyl)lysine <=> CoA + [Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] S-(3-methylbutanoyl)dihydrolipoyllysine) R10998 (Propanoyl-CoA + Enzyme N6-(dihydrolipoyl)lysine <=> CoA + Enzyme N6-(S-propyldihydrolipoyl)lysine)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G05590.1	ribosomal protein L18. Encodes cytoplasmic ribosomal protein L18.
RefSeq	XP_020254892.1	60S ribosomal protein L18-2-like isoform X1 [Asparagus officinalis]
Swiss-Prot	P42791	Large ribosomal subunit protein eL18y OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2
TrEMBL	A0A5P1FK57	Ribosomal_L18e/L15P domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C02F21480 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg35164, jg37930, jg8909
Aizoaceae	Mesembryanthemum crystallinum	2	gene_10392, gene_6370
Amaranthaceae	Atriplex hortensis	3	Ah005715, Ah029415, Ah029416
Amaranthaceae	Beta vulgaris	2	BVRB_4g076000, BVRB_7g163580
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg1285, Sbi_jg17178, Sbi_jg35284, Sbi_jg61787
Amaranthaceae	Salicornia europaea	2	Seu_jg3430, Seu_jg439
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00015370, GOSA_00024397, GOSA_00026796
Amaranthaceae	Suaeda glauca	2	Sgl74090, Sgl77570
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000007770, gene:ENSEOMG00000008760 ... gene:ENSEOMG00000031062, gene:ENSEOMG00000035938, gene:ENSEOMG00000040553, gene:ENSEOMG00000042559
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.4AG0007860, CQ.Regalona.r1.4BG0008000 ... CQ.Regalona.r1.7AG0012850, CQ.Regalona.r1.7AG0021760, CQ.Regalona.r1.7BG0014820
Anacardiaceae	Pistacia vera	2	pistato.v30008880, pistato.v30081600
Apiaceae	Apium graveolens	3	Ag10G01811, Ag2G02519, Ag9G02267
Arecaceae	Cocos nucifera	4	COCNU_01G001630, COCNU_12G002580, COCNU_16G003640 ... scaffold010452G000020
Arecaceae	Phoenix dactylifera	6	gene-LOC103696227, gene-LOC103703629, gene-LOC103721685 ... gene-LOC120105778, gene-LOC120106974, gene-LOC120107273
Asparagaceae	Asparagus officinalis	4	AsparagusV1_02.2148.V1.1, AsparagusV1_04.1389.V1.1 ... AsparagusV1_08.1454.V1.1, AsparagusV1_10.854.V1.1
Asteraceae	Flaveria trinervia	4	Ftri11G04124, Ftri12G10345, Ftri15G00353, Ftri3G14162
Brassicaceae	Arabidopsis thaliana	3	AT2G47570.1, AT3G05590.1, AT5G27850.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10004865m.g.v1.0, Thhalv10021598m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp2g20970.v2.2, Sp3g04470.v2.2
Brassicaceae	Brassica nigra	6	BniB01g058010.2N, BniB02g078970.2N, BniB04g004730.2N ... BniB07g032840.2N, BniB07g038700.2N, BniB07g062550.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq06G0982, Ceq06G1153
Casuarinaceae	Casuarina glauca	2	Cgl06G1012, Cgl06G1203
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno15g06210, gene.Cymno15g06300, gene.Cymno17g01210 ... gene.Cymno18g01160
Dunaliellaceae	Dunaliella salina	1	Dusal.0152s00012.v1.0
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate01g03120, gene.Thate06g16680, gene.Thate07g09400
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG03.2491, evm.TU.LG04.373
Plantaginaceae	Plantago ovata	3	Pov_00023797, Pov_00024906, Pov_00036808
Plumbaginaceae	Limonium bicolor	4	Lb1G06502, Lb1G07594, Lb2G12654, Lb4G24504
Poaceae	Echinochloa crus-galli	9	AH01.3698, AH03.4043, AH05.1020, BH01.4049, BH03.4380 ... BH05.1070, CH01.4314, CH05.1220, CH07.136
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_3AG0247680, gene-QOZ80_3BG0280550 ... gene-QOZ80_5AG0404260, gene-QOZ80_7AG0581600, gene-QOZ80_7BG0612680
Poaceae	Lolium multiflorum	3	gene-QYE76_009996, gene-QYE76_010063, gene-QYE76_038797
Poaceae	Oryza coarctata	6	Oco05G013160, Oco06G013270, Oco09G002620, Oco10G002710 ... Oco13G015680, Oco14G016500
Poaceae	Oryza sativa	3	LOC_Os03g22180.1, LOC_Os05g06310.1, LOC_Os07g47780.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G359600, gene-BS78_02G388300 ... gene-BS78_09G056800
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0102699, Pt_Chr0305525, Pt_Chr0305565, Pt_Chr0501925
Poaceae	Sporobolus alterniflorus	8	Chr01G012120, Chr04G011010, Chr12G024530, Chr18G000740 ... Chr19G000460, Chr22G014950, Chr24G012430, Chr27G017120
Poaceae	Thinopyrum elongatum	3	Tel1E01G203200, Tel2E01G236400, Tel4E01G254300
Poaceae	Triticum dicoccoides	7	gene_TRIDC1AG016800, gene_TRIDC1BG018140 ... gene_TRIDC2AG013110, gene_TRIDC2BG016120, gene_TRIDC4AG020120, gene_TRIDC4BG030350, gene_TRIDC7BG037350
Poaceae	Triticum aestivum	8	TraesCS1A02G096500.2, TraesCS1B02G127200.1 ... TraesCS1D02G105500.2, TraesCS2A02G109900.1, TraesCS2B02G127900.1, TraesCS2D02G110100.1, TraesCS4B02G166800.1, TraesCS4D02G169400.1
Poaceae	Zea mays	3	Zm00001eb282790_P004, Zm00001eb330480_P001 ... Zm00001eb346100_P001
Poaceae	Zoysia japonica	6	nbis-gene-110, nbis-gene-18156, nbis-gene-23448 ... nbis-gene-3321, nbis-gene-33230, nbis-gene-41661
Poaceae	Zoysia macrostachya	4	Zma_g26460, Zma_g27723, Zma_g5772, Zma_g7065
Portulacaceae	Portulaca oleracea	6	evm.TU.LG01.105, evm.TU.LG03.857, evm.TU.LG04.644 ... evm.TU.LG08.700, evm.TU.LG12.880, evm.TU.LG22.1310
Posidoniaceae	Posidonia oceanica	3	gene.Posoc02g07950, gene.Posoc04g17960, gene.Posoc07g11760
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_1_RagTag.99, evm.TU.Scaffold_2_RagTag.2073 ... evm.TU.Scaffold_5_RagTag.842, evm.TU.Scaffold_9_RagTag.805
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-11497, nbisL1-mrna-21423, nbisL1-mrna-2887
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-12847, nbisL1-mrna-14198, nbisL1-mrna-19971
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-11475, nbisL1-mrna-13670, nbisL1-mrna-18494
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000003l.596, evm.TU.utg000006l.206 ... evm.TU.utg000009l.46
Rhizophoraceae	Kandelia obovata	3	Maker00005041, Maker00009832, Maker00013573
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-10092, nbisL1-mrna-12993, nbisL1-mrna-1575 ... nbisL1-mrna-7888
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-16140, nbisL1-mrna-5243, nbisL1-mrna-7469 ... nbisL1-mrna-90
Salicaceae	Populus euphratica	5	populus_peu13340, populus_peu15667, populus_peu27282 ... populus_peu31257, populus_peu31268
Solanaceae	Lycium barbarum	3	gene-LOC132603186, gene-LOC132610570, gene-LOC132645985
Solanaceae	Solanum chilense	2	SOLCI001828600, SOLCI006761100
Solanaceae	Solanum pennellii	2	gene-LOC107006365, gene-LOC107031740
Tamaricaceae	Reaumuria soongarica	3	STRG.32707_chr09_-, gene_4879, gene_7063
Tamaricaceae	Tamarix chinensis	2	TC01G0393, TC02G0844
Zosteraceae	Zostera marina	1	Zosma06g02920.v3.1