Basic Information
Locus ID:
AsparagusV1_02.1960.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Calcium calmodulin-dependent serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 77760554 | 77763043 | + | AsparagusV1_02.1960.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.67 | 40,157.63 Da | 45.02 | 88.96 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 113 | 355 | 1.23566E-116 | - |
| Pfam | PF00069 | Protein kinase domain | 118 | 355 | 1.2E-61 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 98 | 355 | 1.62E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 107 | 355 | 6.0E-74 | - |
| SMART | SM00220 | serkin_6 | 114 | 355 | 3.2E-69 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 114 | 355 | 46.095932 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 238 | 250 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 120 | 146 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_010922072.1 | calcium/calmodulin-dependent serine/threonine-protein kinase 1 [Elaeis guineensis] | 0 |
| O80673 | CDPK-related kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FJM5 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C02F19600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology