Basic Information
Locus ID:
AsparagusV1_02.190.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 2876795 | 2881199 | + | AsparagusV1_02.190.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 38,758.98 Da | 42.19 | 104.03 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 260 | 330 | 6.2E-13 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 58 | 250 | 3.1E-31 | IPR002524 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 254 | 331 | 3.01E-17 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 54 | 251 | 2.75E-40 | IPR027469 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 56 | 249 | 2.8E-42 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 252 | 332 | 6.1E-19 | IPR036837 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 56 | 331 | 5.4E-33 | IPR002524 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39450.1 | Cation efflux family protein. Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance. | 0 |
| RefSeq | XP_020252287.1 | LOW QUALITY PROTEIN: metal tolerance protein 5-like, partial [Asparagus officinalis] | 0 |
| Q5NA18 | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1FFU8 | ZT_dimer domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C02F1900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology