Basic Information
Locus ID:
AsparagusV1_02.1467.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 50870088 | 50873057 | + | AsparagusV1_02.1467.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 108,212.57 Da | 34.29 | 110.06 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 719 | 987 | 6.9814E-84 | - |
| Pfam | PF13855 | Leucine rich repeat | 288 | 327 | 2.6E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 536 | 594 | 1.3E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 93 | 152 | 2.4E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 715 | 914 | 1.1E-39 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 405 | 1.46E-44 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 412 | 621 | 1.02E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 691 | 984 | 3.91E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 161 | 243 | 2.5E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 159 | 3.5E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 789 | 989 | 5.2E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 675 | 788 | 2.7E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 247 | 364 | 2.8E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 365 | 626 | 1.9E-48 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 534 | 558 | 71.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 210 | 234 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 162 | 186 | 320.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 713 | 988 | 4.2E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 115 | 139 | 65.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 713 | 989 | 37.17738 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 833 | 845 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 719 | 741 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 142 | 155 | 2.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 534 | 547 | 2.4E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_020254398.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Asparagus officinalis] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FN67 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C02F14670 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology