Basic Information
Locus ID:
AsparagusV1_02.1451.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 50123865 | 50197682 | - | AsparagusV1_02.1451.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 95,270.44 Da | 35.14 | 93.24 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 554 | 821 | 6.5606E-98 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 551 | 817 | 1.6E-48 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 160 | 216 | 1.3E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 534 | 833 | 8.34E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 16 | 313 | 2.55E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 203 | 351 | 1.3E-11 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 624 | 844 | 3.9E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 523 | 623 | 2.0E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 11 | 202 | 3.1E-45 | IPR032675 |
| SMART | SM00220 | serkin_6 | 548 | 821 | 4.7E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 548 | 822 | 39.156139 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 554 | 576 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 668 | 680 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020254380.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X2 [Asparagus officinalis] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FI93 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C02F14510 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology