Basic Information
Locus ID:
AsparagusV1_02.1356.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 43564770 | 43570001 | - | AsparagusV1_02.1356.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.95 | 15,112.86 Da | 54.80 | 49.17 | -1.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 131 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 67 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A5P1FM48 | AT-hook motif nuclear-localized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C02F13560 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 7 | AsparagusV1_01.39.V1.1, AsparagusV1_02.1356.V1.1 ... |